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    • Repository for spatial resampling, kernel harmonization and semantic field of view extension for the National Lung Screening Trial dataset
      Jupyter Notebook
      MIT License
      0000Updated Apr 17, 2026Apr 17, 2026
    • Python
      Other
      0000Updated Apr 16, 2026Apr 16, 2026
    • FLAIR Tractography without subject-specific anatomical context.
      Python
      0000Updated Apr 15, 2026Apr 15, 2026
    • Python
      0000Updated Apr 13, 2026Apr 13, 2026
    • modified SATLoss to fit for eye CT
      Python
      MIT License
      3000Updated Mar 31, 2026Mar 31, 2026
    • Centerline-guided mesh registration tools for mapping deformed ex vivo organ surfaces to 3D anatomical atlases while preserving local geometry.
      Python
      0000Updated Mar 27, 2026Mar 27, 2026
    • singularity to register an atlas to the diffusion space of a subject
      Jupyter Notebook
      0210Updated Mar 25, 2026Mar 25, 2026
    • gsplat

      Public
      CUDA accelerated rasterization of gaussian splatting
      Python
      Apache License 2.0
      790000Updated Mar 24, 2026Mar 24, 2026
    • custom unet with topo loss trainer, experiments?
      Python
      Apache License 2.0
      2.4k000Updated Mar 13, 2026Mar 13, 2026
    • Manifest-driven pipeline to stage symlink-heavy DICOM trees into Subject/Session/Series structure, optionally zip sessions per subject, sync reliably with resum…
      0000Updated Feb 27, 2026Feb 27, 2026
    • Jupyter Notebook
      MIT License
      0000Updated Feb 13, 2026Feb 13, 2026
    • PreQual

      Public
      An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
      Python
      Other
      105322Updated Feb 11, 2026Feb 11, 2026
    • Code for calculating mean absolute surface distance.
      Python
      MIT License
      0000Updated Feb 11, 2026Feb 11, 2026
    • Jupyter Notebook
      MIT License
      0000Updated Feb 11, 2026Feb 11, 2026
    • DeepFixel: Deep learning-based identification of crossing fiber bundle elements
      Python
      MIT License
      2000Updated Feb 11, 2026Feb 11, 2026
    • Shell
      0100Updated Feb 6, 2026Feb 6, 2026
    • Automated QA for ADSP processing
      Python
      MIT License
      2521Updated Jan 21, 2026Jan 21, 2026
    • DisCo_ext

      Public
      Jupyter Notebook
      0000Updated Dec 18, 2025Dec 18, 2025
    • BRAID

      Public
      BRain Age Identification from Diffusion MRI (BRAID)
      Python
      Other
      2400Updated Dec 12, 2025Dec 12, 2025
    • Python
      0000Updated Nov 12, 2025Nov 12, 2025
    • Roff
      8000Updated Oct 31, 2025Oct 31, 2025
    • Can we turn whole-head MRIs to photorealistic avatars?
      Python
      MIT License
      0300Updated Oct 10, 2025Oct 10, 2025
    • open_dive

      Public
      Open Diffusion Visualization for Everyone - BrainHack Vandy 2025
      Python
      MIT License
      8951Updated Aug 20, 2025Aug 20, 2025
    • Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
      Python
      22100Updated Aug 6, 2025Aug 6, 2025
    • Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
      Python
      MIT License
      83310Updated Jul 31, 2025Jul 31, 2025
    • Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
      Python
      MIT License
      338821Updated Jul 31, 2025Jul 31, 2025
    • DeepFixel: Deep learning-based identification of crossing fiber bundle elements
      Python
      MIT License
      2000Updated Jul 29, 2025Jul 29, 2025
    • Statistical test methods for SLANT-TICV
      Python
      1000Updated Jul 26, 2025Jul 26, 2025
    • Jupyter Notebook
      0000Updated Jul 10, 2025Jul 10, 2025
    • Shell
      MIT License
      1000Updated Jul 1, 2025Jul 1, 2025
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