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Package: interplex
Title: Coercion Methods for Simplicial Complex Data Structures
Version: 0.1.2
Authors@R: c(
person(
given = "Jason Cory",
family = "Brunson",
email = "cornelioid@gmail.com",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0003-3126-9494")),
person(
given = "Yara",
family = "Skaf",
role = c("ctb")))
Description: Computational topology, which enables topological data analysis
(TDA), makes pervasive use of abstract mathematical objects called
simplicial complexes; see Edelsbrunner and Harer (2010)
<doi:10.1090/mbk/069>.
Several R packages and other software libraries used through an R interface
construct and use data structures that represent simplicial complexes,
including mathematical graphs viewed as 1-dimensional complexes.
This package provides coercers (converters) between these data structures.
Currently supported structures are complete lists of simplices as used by
'TDA'; the simplex trees of Boissonnat and Maria (2014)
<doi:10.1007/s00453-014-9887-3> as implemented in 'simplextree' and in
Python GUDHI (by way of 'reticulate'); and the graph classes of 'igraph' and
'network', by way of the 'intergraph' package.
Imports:
intergraph,
igraph (>= 0.6-0),
network (>= 1.4-2),
simplextree (>= 0.9.1),
reticulate
Suggests:
igraphdata,
TDA,
roxygen2,
rmarkdown,
testthat
License: GPL (>= 3)
Encoding: UTF-8
URL: https://github.com/tdaverse/interplex
BugReports: https://github.com/tdaverse/interplex/issues
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1