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@biotite-dev Biotite development

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    12 repositories

    • biotite

      Public
      A comprehensive library for computational molecular biology
      bioinformaticsstructural-biologycomputational-biology
      bioinformaticsstructural-biologycomputational-biologypdb-filessequence-analysis
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •135•942•31•11•Updated Apr 20, 2026Apr 20, 2026

    • hydride

      Public
      Adding hydrogens to molecular models
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•61•6•1•Updated Nov 24, 2025Nov 24, 2025

    • springcraft

      Public
      Investigate molecular dynamics by elastic network models
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •4•9•1•0•Updated Nov 10, 2025Nov 10, 2025

    • biotraj

      Public
      Reading structures from trajectory files.
      C
      •
      GNU Lesser General Public License v2.1
      •2•1•0•1•Updated Sep 22, 2025Sep 22, 2025

    • fastpdb

      Public
      A high performance drop-in replacement for Biotite's PDBFile.
      Rust
      •
      BSD 3-Clause "New" or "Revised" License
      •3•42•0•1•Updated May 27, 2025May 27, 2025

    • molmarbles

      Public archive
      A bridge between Biotite and OpenMM
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•15•0•0•Updated Mar 16, 2025Mar 16, 2025

    • ammolite

      Public archive
      Visualize structure data from Biotite with PyMOL
      bioinformaticscomputational-biologymolecular-visualization
      bioinformaticscomputational-biologymolecular-visualization
      Python
      •
      Other
      •3•26•0•0•Updated Mar 16, 2025Mar 16, 2025

    • .github

      Public
      Documents regarding the entire orgnization
      0•0•0•0•Updated Jan 20, 2025Jan 20, 2025

    • biotite-util

      Public archive
      Python
      •1•0•0•0•Updated Apr 5, 2024Apr 5, 2024

    • article-notebooks

      Public
      Jupyter notebooks from the 2023 journal article
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated May 9, 2023May 9, 2023

    • gecos

      Public
      Generated color schemes for sequence alignment visualizations
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•18•0•0•Updated Jul 20, 2022Jul 20, 2022

    • staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5.9k•0•0•0•Updated Jul 16, 2022Jul 16, 2022
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